miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|25885623|gb|BU377622.1|BU377622 CTGGGCCGTGTGGTGCACATCATCCAGTCCCGGGAGCCCTCACTGCGTGATTCCAACCCCGAGGAGATTGAGATCGACTT
CGAGACCCTCAAACCCTCCACACTGCGTGAGCTGGAGCGCTACGTGCTGTCCTGCCTGCGGAAGAAACCCCGCAAACCCT
ATAGCGAGACCATGAAGAAGCCGGTGGGGAAGACGAAAGAAGAACTGGCGCTGGAGAAGAAGCGGGAGCTGGAGAAGCGG
CTGCAGGATGTCAGCGGGCAGCTCAACTCAGCCAAGAAACCCCCAAAAAAGGCCAACGAGAAGCCCGAGTCAGCACAGCA
GGTGGCTGTTTCACGGCTCAGCGCCTCCAGCTCCAGCTCCGACTCCAGCAGCTCCAGTTCCAGCTCCTCGTCCTCGGACA
CCAGCGACTCGGATTCGGGTTAAACCCCACAGCACCACATGGGGCAGCATCCCGAGCGGCTCTGCGGGACCGGGCCGGCA
TGGAGCAGACTGAGAGCCCCCCAGCAGCCCAGGGGACGCCCCATTGGACTCAGCTGGGGGTCCCGGTGTGACCGGAGGCC
CCCGAGCGTCCCCAGGCAGTGTGGGGGCTGTGGGGTCGGACAAGGGGGGTTGGCGGTGCCCCAGCAGTTTTACTGTCGTG
TGTAGGGTTGGCTTTTTTTTTTTTCCCTCCTGACTCGTGGAATTTTTCCAAAAAAAAAAAACGGGGGGGGGGGAAAAAAA
GGTGGGCGTTAAAAAA




Most similar to sp|P25440|BRD2_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P25440|BRD2_HUMAN Bromodomain-containing protein 2 OS=Homo sapiens
            GN=BRD2 PE=1 SV=2
          Length = 801

 Score =  130 bits (327), Expect = 9e-30
 Identities = 76/115 (66%), Positives = 78/115 (67%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1    LGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYSETMKK 180
            LGRVVHIIQ+REPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPY  T+KK
Sbjct: 662  LGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPY--TIKK 719

Query: 181  PVGKTXXXXXXXXXXXXXXXXQDVSGQL--XXXXXXXXXXXXXXXXXQQVAVSRL 339
            PVGKT                QDVSGQL                   QQVAVSRL
Sbjct: 720  PVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKANEKTESSSAQQVAVSRL 774